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Table 2 Genes and SNPs common to patients with CAKUT accompanied by cryptorchidism

From: Involvement of the bone morphogenic protein/SMAD signaling pathway in the etiology of congenital anomalies of the kidney and urinary tract accompanied by cryptorchidism

Gene Symbol

Gene Name

Gene ID

Chromosomal location

RefSeq

SNPs

SNP ID

Amino acid replacement

SMAD4

SMAD family member 4

4089

chr18: 48584791

A

C

–

His290Pro

   

chr18: 48584794

A

C

–

His291Pro

ITGA8

Integrin a8

8516

chr10: 15573050

A

G

rs1041135

Val979Ala

GRIP1

Glutamate receptor interacting protein 1

23426

chr12: 66786091

G

C

rs7970387

Gln822Glu

FREM2

FRAS1 related extracellular matrix protein 2

341640

chr13: 39263714

T

C

rs2496423

Ser745Pro

   

chr13: 39,430,314

C

T

rs9548509

Thr2326Ile

FREM1

FRAS1 related extracellular matrix protein 1

158326

chr9: 14737506

T

G

rs10961689

Gln2143Pro

TNXB

Tenascin XB

7148

chr6: 31977391

C

T

rs6457477

Arg504His

BMP8B

Bone morphogenetic protein 8b

656

chr1: 40230336

C

G

rs179472

Ser276Thr

SALL1

Spalt-like transcription factor 1

6299

chr16: 51171175

C

T

rs4614723

Val1178Ile