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Table 3 Analysis of linkage disequilibrium in exon 11 SNPs

From: Genetic variation in SPAG16 regions encoding the WD40 repeats is not associated with reduced sperm motility and axonemal defects in a population of infertile males

Haplotype

Observed

Expected

CG

0.333

0.136

AG

0

0.197

CC

0.075

0.272

AC

0.592

0.394

 

r2

.724

 

D'

1,000

  1. Linkage equilibrium analysis of two SNPs found in the sample population and present in the genomic proximity: in order, rs2042791 (major A; minor C) and rs2042792 (major C; minor G).