Genomic case report of a low grade bladder tumor metastasis to lung

BMC Urology

Table 1 List of a Few Important Variants Shared Between Primary Bladder Tumor And Lung Metastasis And Variants Unique to the Lung Metastasis

							Primary Bladder Tumor		Lung Metastasis
	Chromosome	Position	Gene	AA Change	Ref	Alt	VAF	Read Depth	VAF	Read Depth	Altered in Bladder Cancer
Shared Between Primary Bladder Tumor and Lung Metastasis	12	49,420,607	KMT2D	R5048C	G	A	37%	169	30%	245	28%
	9	137,328,351	RXRA	S427F	C	T	48%	136	28%	184	10%
	2	198,267,350	SF3B1	Q669H	T	A	43%	212	41%	153	6%
	2	85,868,233	USP39	F473 L	C	A	27%	112	34%	108	4%
	12	2,566,842	CACNA1C	R243C	C	T	29%	69	30%	204	6%
	X	41,204,468	DDX3X	D354G	A	G	79%	179	53%	104	4%
	4	183,676,006	TENM3	R1496W	C	T	46%	108	26%	172	8%
Unique to Lung Metastasis	1	11,217,230	MTOR	C1483F	C	A	1%	160	19%	172	2.4%
	6	89,616,132	RNGTT	R132H	C	T	0%	128	22%	82	2.4%
	8	77,761,863	ZFHX4	V1254A	T	C	0%	187	22%	154	18%

Ref reference sequence, Alt alternate sequence, VAF variant allele frequency

ISSN: 1471-2490