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Serologic and urinary characteristics of laboratory-confirmed genitourinary tuberculosis at a tertiary hospital in the Philippines



Genitourinary tuberculosis (GUTB) is known to cause high rates of structural organ damage, however, literature on its biochemical manifestations is limited. Additionally, local studies in the Philippine setting, where cases are rampant, are few and dated. This study aimed to determine the serologic and urinary profile of patients with GUTB admitted at a tertiary hospital within January 2009 to March 2020 and their association with short-term outcomes.


This retrospective study included 112 patients with laboratory-confirmed GUTB (i.e., positivity in acid-fast smear, polymerase chain reaction, culture, or histology). Demographic data, clinical characteristics, laboratory and radiologic findings, histopathology reports, treatment, and short-term outcomes were recorded.


Bladder (54.5%) and kidney (36.4%) were the most affected organs. The male:female ratio was 1:1.15, and the mean age was 35.79 ± 18.29 years. Weakness (14.29%) was the most common chief complaint. A majority presented with anemia (83.04%), while several had leukocytosis (41.96%) and thrombocytosis (26.79%). Hypoalbuminemia (58.10%), impairment of renal function (36.94%), and electrolyte abnormalities such as hyponatremia (50.93%), hypercalcemia (20.19%), and hypokalemia (21.82%) were common. Proteinuria (67.96%) and pyuria (67.96%) were the most frequent abnormal findings, followed by hematuria (51.46%), acidic urine (45.63%) and low specific gravity (31.07%). Age, leukocytosis, and the need for pressors were all significantly associated with mortality (p values of <0.001, 0.010, and <0.001, respectively).


The young age at presentation with severe clinical and laboratory manifestations may reflect local epidemiology as TB continues to be widespread in the country. Apart from the more commonly cited abnormalities in literature, multiple electrolyte imbalances and urinary concentration defects were also observed in many cases, possibly indicating tubulointerstitial involvement—a complication increasingly mentioned in case reports. As several patient characteristics were found to be associated with the high mortality rates observed in the study, further research is recommended to explore predictive modeling.

Peer Review reports


Tuberculosis (TB) remains an important global epidemic, with latest estimates of disease burden amounting to 10.0 (range, 9.0–11.1) million people in 2018 [1]. Extrapulmonary TB (EPTB) is reported to comprise around 16.5–25% of all cases, attributing 4.5–27% to genitourinary TB (GUTB) [2,3,4]. GUTB historically pertains to the infection of the urogenital system organs in any combination by Mycobacterium tuberculosis (MTB) or Mycobacterium bovis [5,6,7,8]. It presents with insidious and late-onset symptoms, making its diagnosis and treatment difficult and delayed, and consequently leading to high rates of structural organ damage and kidney failure [9, 10]. Some physicians advocate the term urogenital TB (UGTB) as kidney TB is the most relevant infection and is more frequently diagnosed than genital TB [5, 6, 11].

Philippines ranked 4th among the countries with high TB burden in 2018, accounting 6% of the global total. It has a TB incidence rate of 554 (311–866) per 100,000 population, and a mortality rate of 24.57 (20–32) per 100,000 population [1]. This high disease prevalence in the country is multifactorial, attributing to high poverty rate, marked social inequities, and rise in slum housing and crowded living conditions from rapid urbanization [12]. In the Filipino pediatric population, GUTB is found to cause 3% of extrapulmonary TB cases admitted in a tertiary hospital [13].

Despite these figures, there is paucity in literature regarding local experience on GUTB, especially with regards to serologic and urinary findings [14,15,16]. The last available reference was published 25 years ago, which also needs to be updated. The study aims to determine the serologic and urinary profile of patients with genitourinary TB admitted at a tertiary government hospital in Philippines and their association with short-term outcomes.


Study design and population

This is a single-center, retrospective study performed at the Philippine General Hospital (PGH; 1500 beds). This study included GUTB patients diagnosed from January 2009 to March 2020 through positivity in at least one of the following: (1) urine acid-fast bacilli (AFB) staining, (2) urine or tissue polymerase chain reaction (PCR) for Mycobacterium tuberculosis, (3) urine or tissue M. tuberculosis culture, and (4) histologic findings of granulomatous inflammation (granulomas composed of epithelioid cells and Langhans giant cells with or without caseous necrosis) [14, 15, 17,18,19]. Culture-positive samples solely involving the female genital tract without urologic involvement, out-patients, in-patients without baseline serologic and urinary tests, and those who got discharged against medical advice were excluded. This study was approved by the University of the Philippines Manila Research Ethics Board and the requirement for informed consent was waived since the investigators evaluated anonymized data.

Data collection and definition of variables

Data collection was done through chart review of patient medical records. This included patient demographics; comorbidities; clinical symptoms; complete blood counts; serum chemistries; urinalysis; results of microbial smears and cultures, diagnostics, and histopathology; treatment; and short-term outcomes. Organ involvement was distinguished in those with tissue samples obtained from biopsies or operations.

Serologic abnormalities were defined as follows: (1) anemia as hemoglobin of < 150 g/L in neonates 0–30 days old, < 105 g/L in 1–23 months of age, < 115 g/L in children 2–9 years of age, < 125 g/L in males 10–17 years of age, < 120 g/L in non-pregnant females 10 years of age and above, < 110 g/L in pregnant women, and < 130 g/L in men 15 years of age and above [20, 21]; (2) thrombocytopenia as platelets < 84,000/µL in newborns ≤ 1 week old, and < 150,000/µL for the rest of the age groups [21, 22]; (3) thrombocytosis as platelets > 450,000/µL [22]; (4) leukocytosis as white blood cells > 34,000/µL in neonates 0–30 days, > 14,000/µL in infants 1–23 months of age, > 12,000/µL in 2–9 years of age, > 10,500/µL in 10–18 years of age, and > 11,000/µL in adults [21, 23]; (5) leukopenia as white blood cells < 9100/µL in neonates 0–30 days, < 6000/µL in infants 1–23 months of age, < 4000/µL in 2–18 years of age, and < 4400/µL in adults [21, 23]; (6) hypoalbuminemia as serum albumin < 18 g/L in premature neonates 1 day old, < 25 g/L in full term neonates < 6 days old, < 19 g/L in 8 days-1 year old, < 34 g/L in 1–3 years of age, < 35 g/L in 4–19 years of age, and < 34 g/L in adults [21]; (7) impaired renal function as estimated glomerular filtration rate < 60 mL/min/1.73 m [2]; (8) hyperkalemia as plasma K+ concentration≥ 5.5 mM [22], (2) hypokalemia as plasma K+ concentration < 3.5 mM [22], (9) hyponatremia as plasma Na+ concentration < 135 mM [22], and (10) hypercalcemia as total serum calcium concentration ≥ 10.4 mg/dL [24].

Urinary findings were defined as: (1) acidic urine as urine pH ≤ 5.5 [24], (2) low specific gravity as urine specific gravity ≤ 1.010, (3) hematuria as three or more erythrocytes per high-power field [24], (4) proteinuria as detection of proteinuria by dipstick examination [22], and (5) pyuria as detection of more than 5 white blood cells per high-power field in urine microscopy or positive leukocyte esterase dipstick testing [15, 24].

Statistical analysis

Descriptive statistics were used in the analysis of this study. Frequency and percentage were used to describe categorical variables and proportions of patients who improved, expired, or developed short-term outcomes such as the need for pressors or renal replacement therapy. Continuous variables were expressed as median.

Associations were determined by bivariate analysis using Fisher’s exact test for characteristics involving 2 categories or Chi-square test for those with > 2 categories. Mean lengths of hospital stay between those with and without the identified clinical, serologic, and urinary characteristics were compared using Mann–Whitney U-test for characteristics involving 2 categories or Kruskal–Wallis test for those with > 2 categories. For all tests, p value of at most 0.05 indicate significance.


A total of 228 patients with laboratory-confirmed GUTB were identified. Ninety-six charts were irretrievable due to institutional limitations in records retention, while 20 cases met the exclusion criteria (Fig. 1). Among the 112 patients included in the study, half (50.0%) had positive smears for urine AFB (Table 1). In those with histopathologic evidence of infection, bladder (n = 12, 54.5%) and kidney (n = 8, 36.4%) were the most involved genitourinary organs. Among those with kidney and ureter involvement, left laterality was observed in 60% (Table 2).

Fig. 1
figure 1

Flow diagram of study selection. DAMA discharged against medical advice

Table 1 Proportion of patients with GUTB
Table 2 Laterality of organ involvement in GUTB patients confirmed by histopathology

Patient characteristics

Baseline clinical characteristics of the patients with GUTB are shown in Table 3. The mean age (± SD) was 35.79 ± 18.29 years (range, 1–82 years) and the male-to-female ratio was 1:1.15 (52:60). Most patients were single or widowed (61.61%) and lived in urban areas (53.57%). Fourteen patients (12.5%) had a previous history of tuberculosis, while 64 patients (57.14%) had present evidence of other organ involvement, with lungs (50.89%) being the most concomitantly involved organ. Twenty-four patients (21.43%) exhibited systemic symptoms such as weakness (14.29%) and fever (7.14%), while 57 patients (50.89%) had genitourinary manifestations as their chief complaint. Flank or abdominal pain was the most common presenting genitourinary symptom (21.43%).

Table 3 Clinical characteristics of patients with GUTB

Serologic and urinary characteristics

Majority of patients presented with anemia (83.04%), while several exhibited leukocytosis (41.96%) and thrombocytosis (26.79%) (Table 4). Of the biochemistry data, hypoalbuminemia (58.10%) was the most common, followed by hyponatremia (50.93%), impairment of renal function (36.94%), hypercalcemia (20.19%), and hypokalemia (21.82%). Of those with urine samples, proteinuria (67.96%) and pyuria (67.96%) were the most common abnormal findings, followed by hematuria (51.46%), acidic urine (45.63%), and low specific gravity (31.07%) (Table 5).

Table 4 Serologic characteristics of patients with GUTB
Table 5 Urinary characteristics of patients with GUTB

Radiological findings

Two patients underwent intravenous pyelography (IVP), with one showing extensive calcifications throughout the urinary tract, while the other revealing non-functioning kidney. Table 6 shows the rest of the imaging findings observed in our investigation.

Table 6 Imaging findings associated with GUTB


Seventy-one patients (63.39%) were initiated on anti-Koch’s treatment during their admission, while 29 individuals (25.89%) underwent surgery. Double J stent insertion (9.82%) and percutaneous tube nephrostomy (8.93%) were the most performed urologic operations (Table 7).

Table 7 Management of admitted patients with GUTB

Short-term outcomes

In-hospital death occurred in 8.04% of the patients. The median hospital length of stay was 11 days, with a minimum hospital stay of 0.67 day to a maximum of 90 days. Fifteen patients (13.39%) required pressors and 1 patient (0.89%) needed renal replacement therapy in the form of hemodialysis throughout their hospital course (Table 8).

Table 8 Short-term outcomes of admitted patients with GUTB

Characteristics associated with short-term outcomes


Age, leukocytosis, and the need for pressors were all significantly associated with mortality (p values of <0.001, 0.010, and <0.001, respectively) (Tables 9, 10, 13). Other characteristics were not significantly associated with mortality (Tables 9, 10, 11, 12, 13).

Table 9 Bivariate analysis: clinical characteristics and mortality
Table 10 Bivariate analysis: serologic characteristics and mortality
Table 11 Bivariate analysis: urinary characteristics and mortality
Table 12 Bivariate analysis: treatments and mortality
Table 13 Bivariate analysis: other outcomes and mortality

Need for pressors

Age, other organ involvement of MTB, gastrointestinal TB, and cutaneous or wound TB, were significantly associated with the need for pressors (p-values of 0.019, 0.035, 0.006, and 0.003, respectively) (Table 14). Other characteristics were not significantly associated with the need for pressors (Tables 14, 15, 16, 17, 18).

Table 14 Bivariate analysis: clinical characteristics and need for pressors
Table 15 Bivariate analysis: serologic characteristics and need for pressors
Table 16 Bivariate analysis: urinary characteristics and need for pressors
Table 17 Bivariate analysis: treatments and need for pressors
Table 18 Bivariate analysis: other outcomes and need for pressors

Mean hospital stay

Marital status, steroid use, systemic lupus erythematosus (SLE), other organ involvement of MTB, pulmonary TB, psoas TB, the presence of anemia, leukocytosis, hypoalbuminemia, hyponatremia, hypercalcemia, and anti-Koch’s treatment had a statistically longer mean length of hospital stay compared to those without these characteristics (Tables 19, 20, 22). Other characteristics were not significantly associated with a longer mean length of hospital stay (Tables 19, 20, 21, 22, 23).

Table 19 Comparison of mean hospital stay by clinical characteristics
Table 20 Comparison of mean hospital stay by serologic characteristics
Table 21 Comparison of mean hospital stay by urinary characteristics
Table 22 Comparison of mean hospital stay by treatments
Table 23 Comparison of mean hospital stay by other outcomes


Genitourinary TB is the second and third most common form of EPTB in countries with high and low TB burden, respectively [9, 19, 25]. According to other registers, however, GUTB is only seen in 1.7–6.5% of the total TB cases reported [26]. In the Philippines, a 5-year retrospective study reported GUTB to have caused 3% of pediatric EPTB cases admitted in a tertiary government hospital [13]. It is important to emphasize that this infection is underdiagnosed in most health care centers, as GUTB remains a diagnostic challenge [9, 19, 25,26,27].

Diagnosis of GUTB is often delayed due to the insidious nature of the disease, non-specificity of symptoms, poor health-seeking behavior of patients, and lack of clinician awareness [28, 29]. In autopsy studies, only half of patients with renal involvement had symptoms, while only 18% were diagnosed clinically [30]. The four pillars to GUTB diagnosis are bacteriology, pathomorphology, radiology, and provocative test with therapy ex juvantibus [6, 19, 31], with culture as the gold standard [25, 29, 32]. In world literature, most cases of GUTB (64.2%) were diagnosed through identification of MTB in the urine, mostly establishing the diagnosis via positive urine culture [9]. Similarly, most retrospective studies in the Asia–Pacific region diagnosed infection based on bacteriologic and histologic findings with consistent clinical history, while a few depended mainly on clinico-radiologic evaluation (Table 24). In our study, the lack of clinical registries of GUTB in our hospital prompted us to instead use laboratory registries for case finding, noting majority of cases being diagnosed based on positivity for urine AFB smear (50.00%). In contrast, one local study observed mycobacterial culture being sent in only 22.2% of urologic cases and in 11.1% of gynecology cases, relying more heavily on clinical, radiographic, and histopathologic assessment [16]. Despite being a recognized tool for diagnosis of GUTB, imaging is particularly useful only during the later stages of the disease when calcifications or cavernous forms have already developed [19, 33]. Nonetheless, this diversity in practice standards is expected in developing countries because of the disproportionate availability of medical facilities and services [34].

Table 24 Studies in the Asia–Pacific region involving patients with GUTB

Many reviews of the world literature [28, 29] noted kidneys to be the most frequently organ, which is consistent with most studies done in the Asia–Pacific region (Table 25). In contrast, some reports observed the bladder to be the most frequently affected genitourinary organ [38, 40], similar to our investigation. Renal involvement of TB infection can either be a localized urogenital disease or a part of a disseminated infection [6]. In literature, up to 10% of affected individuals have concomitant active pulmonary TB, suggesting hematogenous or lymphatic spread to this highly vascularized organ [28]. The latent period between pulmonary infection and development of clinical GUTB is described to range from 1 to 46 years, averaging around 22 years [29]. Infection may also be acquired hematogenously from the gut [28]. Other genitourinary organs may become affected through ascent or descent of MTB from a source elsewhere in the genitourinary tract, or from contact with the bacilli shed into the urine [26]. They may also get involved from descending spread from the lymphatics [29] or from sexual intercourse [28].

Table 25 Studies in the Asia–Pacific region describing the demographic features of patients with GUTB

Unilateral organ involvement is commonly shown in retrospective, clinical, and autopsy studies [28, 33, 36, 38, 41]. In our investigation, left laterality was observed in 60% of those with kidney and ureter involvement, consistent with other reports [36, 41]. Renal lesions are initially described to be bilateral attributing to hematogenous spread. They generally undergo a period of cicatrization then enter a latent phase of infection, only reactivating the moment an individual becomes immunocompromised. From a single focus, infection eventually progresses, affecting one kidney while sparing the other. This phenomenon accounts for the greater frequency of unilateral renal TB [9].

Patient characteristics

Our investigation noted several patients having chronic diseases (e.g., diabetes mellitus, hypertension, chronic kidney disease), immunocompromised conditions (e.g., HIV/AIDS, steroid use), history of tuberculosis, or presence of TB in other organs. Traditionally, risk factors for developing TB include malnutrition, immunosuppression, HIV infection, diabetes, chronic kidney or liver disease, smoking, and low socioeconomic status [25, 28]. Factors considered high-risk for GUTB include past or present TB infection, recurrent or resistant urinary tract infection, and fistulas involving the scrotum, perineum, or lumbar area [5]. Emergence of drug-resistant strains of TB as well as anatomical abnormalities of the urogenital tract from congenital conditions, renal cysts, and urolithiasis also predispose to its development [19]. In our study, a substantial number of patients were single or widowed (61.61%), lived in urban areas (53.57%), and were unemployed (51.79%). In comparison, several studies reported most patients to be living in the hilly region of the state (68%), working as farmers (21–56%) or unemployed (20.0–24.6%), and having low socioeconomic status (80.0–88.7%) [33, 36, 39, 41].

Worldwide, cases encountered between developed and developing countries exhibit different patterns. In developed countries, GUTB mainly affects the elderly, ethnic minorities, and immigrants [6, 9]. On the other hand, patients from developing countries are younger due to higher incidence and severity of TB disease. They present with more specific symptoms and complications which are further exacerbated by delays in diagnosis [9]. Our data demonstrated a mean age of 35.79 ± 18.29 years, with 22.32% belonging to the pediatric population. These findings are consistent with most studies in the region (Table 25). GUTB generally has the propensity to infect both men and women of child-bearing age (20–40 years old), with a mean age of 40.7 years (range, 5–88 years) [25, 29]. We also report a male-to-female ratio of 1:1.15 (52:60). A proper estimate is controversial since there is a lack of controlled epidemiological and clinical studies [28]. While some report more men to be affected than women (2:1) [29], others report women to be affected twice as many as men [28]. Even among past local data, sex distribution was inconsistent [15, 16]. Variation between geographical regions might reflect local TB endemicity or study bias, thereby making accurate epidemiological and clinical data on GUTB difficult to obtain [28].

Clinical manifestations

GUTB does not present with any specific clinical feature and may in fact be asymptomatic [6]. Up to 50% of cases are incidentally diagnosed when patients undergo work-up for other genitourinary disorders [28]. In those with symptoms, storage symptoms (e.g., urinary frequency, urgency, incontinence, nocturia) were the most common presentation on admission, followed by dysuria, hematuria, and lumbar pain [9, 26, 29]. In our study, we recorded 50.89% of patients to have genitourinary manifestations as their chief complaint, with 21.43% having flank or abdominal pain. Several studies also mentioned abdominal or hypogastric pain to be common (19.6%-42.9%) [15, 16, 35, 41].

We noted 21.43% of patients to have systemic symptoms such as weakness and fever as their initial complaints, while 12.50% manifested with difficulty of breathing. Such findings might be explained by the high rates of TB infection in other organ systems (57.14%), with lungs being the most common extra-genitourinary site (50.89%). In some literature, constitutional symptoms such as fever, weight loss, and night sweats are uncommon and, if present, are indicative of concomitant TB outside the genitourinary system. Some patients may initially present with a myriad of symptoms reflective of other concomitant infections like PTB and hence GUTB symptoms and signs are not always defined by the anatomical site of disease [28]. Moreover, secondary bacterial infections can concurrently occur in up to 50% of patients with GUTB [25, 28]. Our data is consistent with most studies in the Asia–Pacific region, with the exception of those done in South Korea where systemic symptoms are relatively uncommon (3–12.5%) [17, 35]. Systemic manifestations are otherwise present in many reports (28.3–75.4%), with fever being the most cited symptom (29–56.1%) (Table 26). Delays in diagnosis may result in disease progression and severe complications seen at presentation [28].

Table 26 Studies in the Asia–Pacific region illustrating the clinical presentation of patients with GUTB

Hematologic abnormalities

Hematological and biochemical tests are considered non-specific and are instead utilized as adjuncts to GUTB management [28]. In our study, majority of patients presented with anemia (83.04%), while several exhibited leukocytosis (41.96%) and thrombocytosis (26.79%). This is similar to past local data, where anemia and leukocytosis were found in 60.0% and 37.0% of patients, respectively [15]. These estimates are higher than what is recorded in literature, where 15.6–46.9% of patients exhibited anemia and 13.0–25.8% had leukocytosis (Table 27). Thrombocytopenia (26.3%) occurred more frequently in some populations [10]. It is important to note that these studies applied different definitions of hematologic abnormalities, making comparison difficult.

Table 27 Studies in the Asia–Pacific region showing serologic and urinary profiles of patients with GUTB

TB infection is traditionally known to affect various cell lines. It can cause anemia attributed to four mechanisms: chronic disease, nutritional deficiencies, autoimmune hemolytic anemia, and marrow complications. It is described to commonly affect all subtypes of granulocytes during its course, predominantly affecting neutrophils either quantitatively or qualitatively. It may result in transient neutrophilia or, in extreme cases, leukemoid reaction. TB may also cause leukopenia, especially in females, elderly, or those with recurrent infections. Neutropenia may occur from direct suppression of granulopoiesis by activated T cells [44]. Lymphopenia and lymphocytosis are also commonly reported in active TB [45]. Lastly, TB may result in various platelet abnormalities. Thrombocytosis is frequently reactive in nature and is related to the degree of inflammation. It is mediated by increased levels of endogenous thrombopoietin produced as an acute-phase reactant. Thrombocytopenia, on the other hand, is usually from bone marrow infiltration, disseminated intravascular coagulation, immune thrombocytopenic purpura, thrombotic thrombocytopenic purpura, or drug-induced [44].

Biochemical abnormalities

Among those with laboratory results, hypoalbuminemia (58.10%) and impairment of renal function (36.94%) were commonly found, similar to those reported in literature, with estimates at 37.5–40.4% and 18.8–75.0%, respectively (Table 27). As plasma creatinine concentration is frequently described to be normal in the setting of unilateral renal involvement, increased levels may indicate bilateral renal involvement or presence of concomitant disorders such as interstitial nephritis or glomerulonephritis [46, 47]. In a review of 8961 cases, 5.7% of patients with GUTB were reported to develop end-stage renal disease (ESRD) [29]. Likewise, one retrospective study in South Korea reported occurrence of ESRD in 7.1% of GUTB patients, identifying acute renal failure and old age as independent risk factors for chronic kidney disease [35].

We also observed several electrolyte abnormalities, specifically hyponatremia (50.93%), hypercalcemia (20.19%), hypokalemia (21.82%), and hyperkalemia (8.18%). Mild hyponatremia has been reported in the setting of active pulmonary or miliary TB, with incidences ranging from 11 to 51% [27, 48]. Most cases are due to syndrome of inappropriate antidiuretic hormone secretion (SIADH), with a third having reset osmostat wherein the plasma sodium stabilizes at lower concentration levels. Mechanisms for such persistent ADH release are yet to be explored, but abnormalities in water handling are demonstrated to resolve following successful treatment of infection [27]. Hyponatremia in TB may also be attributed to adrenal insufficiency. Hyponatremia from this condition is accompanied by hyperkalemia and increased urinary potassium excretion. Cerebral salt wasting is another mechanism for hyponatremia, usually seen in patients with tuberculous meningitis [48]. Lastly, patients with kidney TB may also develop salt-losing nephropathy [49].

Tubulointerstitial nephritis (TIN) is one possible complication of TB which might contribute to the multiple electrolyte abnormalities seen in patients with infection. Several case reports described the development of chronic granulomatous TIN in patients with TB as evidenced by renal biopsy [50,51,52,53]. Unlike the other studies, one case series in west London found only 18.7% of those with granulomatous inflammation on renal biopsy to exhibit caseation necrosis [53], whereas another study in France raised the possibility of severe TIN in TB despite the absence of renal granuloma [54]. Although reports on this tubulointerstitial disorder are increasing, mechanisms for its development are poorly understood [55].

Hypercalcemia is another electrolyte abnormality commonly cited in patients with TB. Surveys from different countries show prevalence rates up to 11%-48%, noting that the actual estimates of prevalence are difficult to establish since concurrent serum albumin levels are not consistently reported [48]. Renal or extrarenal TB granulomas accounted for the non-physiologic synthesis of 1,25-dihydroxyvitamin D3 and the ensuing hypercalcemia [56]. Calcification is unusual in the early stages of infection, however, in the advanced stages, nearly all kidneys contains calcification [26].

Urinary abnormalities

Urinalysis is abnormal in up to 90% of patients with GUTB, with findings ranging from mild changes to extreme pyuria [6, 29, 57]. Pyuria with or without microscopic hematuria is seen in majority of patients, whereas heavy proteinuria and cellular casts are not generally observed [6, 26]. Persistent sterile pyuria, pyuria in an acidic urine without growth on routine culture, or symptomatic UTI unresponsive to standard antibiotics should prompt suspicion of GUTB [6, 25, 28, 58]. Our study showed proteinuria (67.96%) and pyuria (67.96%) to be the most common urinary findings, consistent with those cited in literature (Table 27). Low specific gravity was also found to be common (31.07%), possibly reflecting poor urinary concentrating ability especially in the setting of chronic kidney disease or tubulopathy.

Radiological findings

Various imaging modalities are used to support the diagnosis of GUTB, with findings dependent upon the extent of disease progression. Despite traditionally being used to suggest, and not to confirm or exclude, the presence of the disease, they are still paramount in management and can still be utilized to confidently diagnose GUTB by those with sufficient experience [59].

Intravenous urogram (IVU) is considered the gold standard for imaging in early renal TB [33, 59]. There might be no abnormalities present during early disease, but there usually appear moderate to severe urinary tract changes once patients become symptomatic [59]. Early findings include infundibular narrowing, calyceal erosion or blunting, and papillary necrosis with associated parenchymal scarring and calcification [27]. GUTB is considered if there is simultaneous involvement of both the upper and the lower urinary tracts, especially the kidney and the bladder [27, 29]. Later stages of the disease may demonstrate extensive cavitation, mass lesions, calyceal distortion, cortical scarring, calcification, autonephrectomy, perinephric abscess, fistula formation, ureteral strictures, and bladder fibrosis [25, 59]. In our study, both patients who underwent intravenous pyelography showed advanced findings of extensive stone formation and non-functioning kidney.

Triphasic computed tomography (CT) scan remains the mainstay imaging technique for cross-sectional imaging in GUTB [6]. It is the most sensitive modality to detect calcification, and is superior to IVU in detecting multiple small urothelial lesions [25, 60]. Findings suggestive of GUTB include the presence of lesions in other organs beyond the urinary tract, such as liver, lymph nodes, and vertebrae [29], as seen in our study.

Although IVU and CT scan are reported to be the more frequently used imaging modalities in GUTB [29], some investigations still heavily rely on ultrasonography [18, 36]. Ultrasonography may only give indirect evidence of GUTB, but it avoids exposure to ionizing radiation and can be conveniently used to guide fine needle aspiration biopsies [5, 25, 59]. In literature, two patterns of GUTB have been described: (1) the infiltrative pattern showing increased echogenicity from calcifications, infected debris, or abscesses; and (2) hydronephrosis or pyonephrosis, involving calyceal dilatation and a small renal pelvis. Another distinguishing feature for GUTB is the visualization of multiple abnormalities in different disease stages with various organ involvement [59]. All these changes were observed in our investigation.


Medical treatment of GUTB should be initiated promptly when clinical, laboratory, and radiological findings suggest a presumptive diagnosis, even prior to the release of microbiologic and histopathologic results [26, 47]. Pharmacologic therapy for drug-sensitive TB consists of an intensive phase of quadruple therapy with first-line anti-TB agents (e.g., isoniazid, rifampicin, pyrazinamide and ethambutol) for 2 months, followed by a continuation phase with two drugs (e.g., isoniazid, rifampicin) for 4 months [28]. In our study, over sixty percent (63.39%) of patients were started on anti-TB therapy during admission, reflecting diverse in-hospital practices wherein several cases were discharged upon resolution of their reasons for encounter, with eventual treatment initiated on an out-patient basis after microbiologic and histopathologic confirmation.

Around half (54.9%) of patients with GUTB require surgery [28, 47]. Indications for surgery include diversion of urologic obstruction, drainage of abscesses, nephrectomy of non-functioning kidneys, reconstruction of affected ureters, and dilation of contracted urinary bladder [26, 28]. A quarter (25.89%) of patients in our study underwent an operation, lower than that observed in a previous local investigation (52%) [15]. This difference might be attributed to the higher proportion of younger individuals involved in our study, whose illness duration may not be long enough to develop complications that would warrant surgical therapy. This finding might signify a changing pattern of disease in the country.

Short-term outcomes

Deaths from tuberculosis are higher in developing (2–3 million deaths per year) than developed countries (40 thousand deaths per year) [9]. In GUTB, mortality rates vary (1.2–28.1%) [10], with most patients succumbing from disseminated infection [15]. In our center, all-cause in-hospital mortality occurred in 8.04% of the included patients. Age, leukocytosis, and the need for pressors were all significantly associated with mortality (p values of <0.001, 0.010, and <0.001, respectively). Several researches in Taiwan investigated risk factors for mortality in patients with GUTB. Fever was shown to be positively correlated with mortality (OR = 42.716; 95% CI 1.032–1767.569; p = 0.048), possibly attributed to its high prevalence in elderly patients, those with multiple co-morbidities, and those who had delays in diagnosis [10]. Other poor prognostic factors included genitourinary tract surgery (OR = 0.000; 95% CI 0.000–0.255; p = 0.020) [10], age older than 65 years old (HR = 4.03; 95% CI 1.27–12.76; p = 0.02), cardiovascular disease (HR = 5.96; 95% CI 1.98–17.92; p = 0.001), steroid use (HR = 10.16; 95% CI 2.27–45.47; p = 0.02), and no treatment (HR = 4.81; 95% CI 1.12–20.67; p = 0.04) [40].

It was observed that patients with longer mean lengths of hospital stay did not necessarily develop unfavorable hospital outcomes. Instead, prolonged admission duration seemed to have been influenced by management of co-morbidities (e.g., SLE, pulmonary TB, psoas TB) and correction of various clinically significant laboratory abnormalities (e.g., anemia, leukocytosis, hyponatremia, and hypercalcemia). Awaiting results of TB workups during admission for diagnosis of equivocal cases and for subsequent initiation of definitive therapy might have also contributed since anti-Koch’s treatment had a statistically longer mean length of hospital stay (p <0.001). These findings were reflective of the varying practices in our center, with many cases undergoing surgery for prompt treatment of symptoms and having medical therapy be initiated on an out-patient basis depending on the results of cultures and histopathology.


Our study had several limitations. Its retrospective design which was affected by institutional limitations in recordkeeping made data collection restricted, as evidenced by a low chart retrieval rate (57.89%, 132/228). Given the absence of a unified clinical registry and data recording, our case finding was laboratory-based and was subject to selection bias, thereby rendering our results nongeneralizable to a broader patient population. It also proved to be a major barrier preventing inclusion of predictive modeling of study outcomes. Despite these limitations, our research is the largest study in the country to date, involving more accurate diagnosis of GUTB compared to past local studies since all reviewed cases had bacteriologic or histopathologic evidence of infection. It also involved more specific definitions of serologic findings adjusted per age and sex.


Our investigation observed a high prevalence rate of serologic and urinary abnormalities among admitted GUTB patients in the study. Apart from the commonly cited abnormalities in literature, multiple electrolyte abnormalities and urinary concentration defects were observed in many cases, possibly indicating tubulointerstitial involvement. Accordingly, we recommend future research be done on such complication to determine its correlation with disease activity and to possibly help with the diagnosis of infection particularly in low-resource settings. Mortality rate was also noted to be high among admitted patients with GUTB. Age, leukocytosis, and need for pressors were significantly associated with mortality. However, further research is recommended to explore predictive modeling.

Availability of data and materials

The datasets used in this study are available from the corresponding author upon reasonable request.


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We would like to thank the Philippine General Hospital and the Division of Nephrology for supporting us in this work. We would also like to thank Prof. Francisco N. de los Reyes for his assistance with our data analysis.


This work was self-funded by the authors.

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Conception and design of study: PNHS and ARTV. Acquisition of data: PNHS. Data analysis and interpretation, drafting of manuscript and critical revision, and approval of final version of manuscript: PNHS and ARTV. All authors read and approved the final manuscript.

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Correspondence to Paolo Nikolai H. So.

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So, P.N.H., Villanueva, A.R.T. Serologic and urinary characteristics of laboratory-confirmed genitourinary tuberculosis at a tertiary hospital in the Philippines. BMC Urol 21, 125 (2021).

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  • Genitourinary tuberculosis
  • Electrolytes
  • Urinalysis
  • Association